The file SARS-CoV-2.fasta contains five genomes of SARS-CoV-2: the ancestor (Wuhan, the first sequenced genome), and representatives of four common variants (Alpha, Delta, Gamma, Omicron). Write code to read the sequences. Find all shared gaps between the SARS-CoV-2 genomes, ie where two or more variant genomes have an insertion or deletion in comparison to Wuhan. Print the position in the alignment and the sequence present in each genome for these positions. Do not print gaps at the beginning or end of the genomes since these are just regions that weren't sequenced and aren't true insertion/deletion events. # Answer

The file SARS-CoV-2.fasta contains five genomes of SARS-CoV-2: the ancestor (Wuhan, the first sequenced genome), and representatives of four common variants (Alpha, Delta, Gamma, Omicron). Write code to read the sequences. Find all shared gaps between the SARS-CoV-2 genomes, ie where two or more variant genomes have an insertion or deletion in comparison to Wuhan. Print the position in the alignment and the sequence present in each genome for these positions. Do not print gaps at the beginning or end of the genomes since these are just regions that weren't sequenced and aren't true insertion/deletion events. # Answer

Database System Concepts

7th Edition

ISBN:9780078022159

Author:Abraham Silberschatz Professor, Henry F. Korth, S. Sudarshan

Publisher:Abraham Silberschatz Professor, Henry F. Korth, S. Sudarshan

Chapter1: Introduction

Section: Chapter Questions

Problem 1PE

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